Assignment: GS 540 HW6
Name: Conor Camplisson
Email: concamp@uw.edu
Language: Python
Runtime: 1.058 sec

Segment Histogram:
Non-Elevated CN Segments=8
Elevated CN Segments=7

Segment List:
48164 48273 66.76
67646 68115 97.51
105528 106003 63.04
106904 107345 41.67
122792 123034 66.56
164376 164665 62.09
165086 166103 225.95

Annotations:

Start: 165086
End: 166103
Description: Something interesting (e.g., "Overlaps with exon5 of the protein coding gene cMyc")

Start: 67646
End: 68115
Description: Something interesting (e.g., "Overlaps with exon5 of the protein coding gene cMyc")

Start: 48164
End: 48273
Description: Something interesting (e.g., "Overlaps with exon5 of the protein coding gene cMyc")

Read start histogram for non-elevated copy-number segments:
0=331908
1=19439
2=4272
>=3=1332

Read start histogram for elevated copy-number segments:
0=1656
1=542
2=352
>=3=499

Program:

int main() {
	do_analysis();
	return 0;
}